Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCC1_0016400

Sequence Length

177 nt

GC Content

0.5480

GGCUCCGUGGCCUAUGUGCCACAGCAGGCCUGGAUUCAGAAUGAUUCUCUCCGAGAAAACAUCCUUUUUGGAUGUCAGCUGGAGGAACCAUAUUACAGGUCCGUGAUACAGGCCUGUGCCCUCCUCCCAGACCUGGAAAUCCUGCCCAGUGGGGAUCGGACAGAGAUUGGCGAGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.30 kcal/mol

Ensemble Metrics

Free Energy: -66.89

Frequency: 0.0149

Diversity: 27.79

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...(((((......))))).(((((((((........(((.(((.((((.((...((((((.....))))))...))))))))).)))(((((......))))).))))))))))))((.(((((((.((((...(((((........)))))....))).).)))).))).))

Thermodynamic Ensemble Prediction

(((...(((((......))))).(((((((((,,.,,,..,{{.{{{.((((.((...((((((.....))))))...)))))))}}.},|{{{((......})))},))))))))))))((.(((((((.((((...,((({.{,,....)))}}.,,,))).).)))).))).))