Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0000200

Sequence Length

250 nt

GC Content

0.3320

UUCUGGAGCUGGGAAGUCCAAGAUAAAGAUGCCAGCAGAUUAGUGUCUGGUGAGGGCCAGCUAUCUCUGCUUUCAAGAUGGCACCUUGUUGAUGUGUCCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGGCUUGAUUUCUUGAAUAUGCUGAGACCCAAUUUGGACUACAUUUGGCAGAAAUGAUGGAGUAAACAGCAAGGCUUUAAAUUAAAUUAAUAGUUACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.40 kcal/mol

Ensemble Metrics

Free Energy: -42.20

Frequency: 0.0001

Diversity: 71.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(((..((.((.....(((((....((.(((((((((...(((.(((((....))))).))).))))))........(((((.........))))).....................................................)))))....)))))......)).))..))))((((((((((((((.....))))).((((((..........))))))...........))))).))))

Thermodynamic Ensemble Prediction

,{{(,,.{(({...|,|||{.,|,.....((((((((((..,(,{.(((((....)))))}}}}.))))),.......,}}}|{|{{{{,{,,|||{{{....................................................{{{.,..{,|...}},,..})),,,..{|,...|)),},,|||||}}},.,,}),.}))).,...)))),)))(({..(((((......)))))..)))