Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0011600

Sequence Length

250 nt

GC Content

0.3160

CAAUCCUCCCACAUCACCAAGUGCUGGAAUUACAGAUGUGAGCCACUGCACCUGGCUCCAAAUAAAUUCUUAAUGUAAGUUUACAUCUUGUAGUCAUUGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUGAUUCUAAGUUAGAAUAUAACGUAGAUGCUGCAAAUGGCAUAGUUAUGGAAGGAUAUCUGUUCAAACGAGCCAGCAAUGCCUUCAAAACUUGGAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.10 kcal/mol

Ensemble Metrics

Free Energy: -41.86

Frequency: 0.0001

Diversity: 63.82

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((.(((((.(((...))).))..(((((((((((((((((.......))))))........................))))).))))))..............................................................(((.((((.....)))).)))(((((......))))).....))).)))))..((((((...((((..................))))))))))

Thermodynamic Ensemble Prediction

..{((({.(({{,...,...})).|}|,(((((((((((((((({.......})))))..........{,,..,,}},),,}))))),}))))),.........................................................,.,((((.((({.....}}}|.|}}|((((,.....))))}.,}},))|{|||}|..((((((....|||.,|}...,,}})}}..,,})))))))))