Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0011700

Sequence Length

200 nt

GC Content

0.4100

UUGGAUCGACUGGUUGUGGAUGCAGCAAAGGAGAAAAGAGAAAUGGAGCAAAAACAUUCCACCAUUCAACAAAAGGCUGCGUUACAGGAUUUCUCCAGUGAUGAUUCUAAGUUAGAAUAUAACGUAGAUGCUGCAAAUGGCAUAGUUAUGGAAGGAUAUCUGUUCAAACGAGCCAGCAAUGCCUUCAAAACUUGGAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-41.40 kcal/mol

Ensemble Metrics

Free Energy: -45.56

Frequency: 0.0012

Diversity: 50.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((.((.....)).))).)))(...(((((((...(.((((.(((..........................))).)))).)....))))))).....((.(((((((((.........((((((((((......)))))..)))))(((((((..((((((....))).)))..)).)))))..))))))))))))

Thermodynamic Ensemble Prediction

(((.({{,((....,}|.}||,|||(...{,,{{{,.,.{.,,(({((........}}}}}...}}}........)))})))},},,,,}}}}))).,,..|{.(((((((((....,,,,,(,{{,{((((......))))).,)))))(((((,{..((((((....)))},))..}}.)))))..)))))))))}})