Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0013400

Sequence Length

457 nt

GC Content

0.3742

AUUACCCAGUCUCAGGCAGUUCUUUAUAGCAGUGUGAGAAUGGACUAAUACUGUGGUCUUGGAUAACAUCUGGAAGAAUUCUCUGGAUUACCAGAUCCUGUUUGACCAAACUCAGAGAUCAAUUAAGGCACAGCUUCAGAACUUUGUUAAAGAAGAUCUUAGAAAAUUCAAAGAUGCCAAGAAGCAAUUCGAAAAAGUCAGUGAAGAAAAAGAAAAUGCGUUAGUAAAAAAUGCCCAAGUACAAAGAAACAAACAACAUGAAGUUGAAGAAGCCACCAACAUUCUGACAGCAACAAGAAAAUGUUUCCGACACAUAGCCCUCGAUUAUGUGCUUCAGAUUAAUGUUCUUCAAUCAAAAAGGAGAUCAGAAAUCCUAAAAUCAUUGGAUCGACUGGUUGUGGAUGCAGCAAAGGAGAAAAGAGAAAUGGAGCAAAAACAUUCCACCAUUCAACAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-81.90 kcal/mol

Ensemble Metrics

Free Energy: -89.71

Frequency: 0.0000

Diversity: 122.01

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((.(((((.((.(((......))).)).))))).))).........)))))((((((.((((((((..(((((..(((((....)))))...(.(((((......))))).)........(((.((((((((....((((((........((((......((((..(((.....(((....)))......)))..))))....))))....(((((.......))))).............)))))).....)))))))).....)))......)))))..)))..........))))))))....(((((((.(((((((((.......((((..((.(((((.........))))).))..)))).......)))..))))))..))))))).....................(((.(((((........)))))...))).....)))

Thermodynamic Ensemble Prediction

((((,(((.(((((.((.(({......})).)).))))).)))........,|||||((((({.{,,((((({.{{{{{.,||{||,,,.))}||{{{{{,|{,,....,.,))),}}},......(((.((((((((....((((({...,....{{{{.,,...{||{.,||{.....{{{....}))......})}..)))}......,.....(((((.......))))).............}}}}}}.....)))))))).....)))......,))))..}}}..........,))))}}|,.{,(((((({.{{{{{||||||.,{..((((..((.(((((.........))))).))..)))).......}}}.,}}||}},.}}}}))},.,.},,....},,,....,,(,,.(((((........)))))...))).....,}}