Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0016700

Sequence Length

250 nt

GC Content

0.3320

UUCUGGAGCUGGGAAGUCCAAGAUAAAGAUGCCAGCAGAUUAGUGUCUGGUGAGGGCCAGCUAUCUCUGCUUUCAAGAUGGCACCUUGUUGAUGUGUCCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGUUUUCUGACAGUCUUCAAGAAAUGAUAAAUUUUCACACAAUCCUGUUUGACCAAACUCAGAGAUCAAUUAAGGCACAGCUUCAGAACUUUGUUAAAGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.90 kcal/mol

Ensemble Metrics

Free Energy: -49.41

Frequency: 0.0001

Diversity: 54.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((((....((..(..(((.((((((((((...(((.(((((....))))).))).)))))........))))).)))..)..))..)))....................................................(.(((((((......(((((....(((.............)))...)))))......))))))).)..........)))))))))))((((...)))).

Thermodynamic Ensemble Prediction

(((((((((((((,...}}..,{,.,.{.((((((((((.,,({{.(((((....)))))}))}.)))))}.......,)))){||||||{,|,,.}}}....................................................,.(((((((......||,,||||,,,.....,,}},.,,....,|}}||}}......})))}})}},,..,,}}..)))))))))))((((...}))).