Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0021500

Sequence Length

250 nt

GC Content

0.3000

GUGUGAGCCACUGCUCCUGGCCUCCCCAUAUGAUUUUUGAAGCAAAUCUCAGAGAGUAUAGAAUUCCAUCAGUAUGUAUGUGUAUGUCUCUGAAAAUAUANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAAAAAGGCAAGGCAUAGUUUUCCAUUGGCUGUCUAUAACCCUAUUCCUUAUUCUAUCACUAUAGAACAAGUAAAUCAUUCAAAAUUGCAAUAGGGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.30 kcal/mol

Ensemble Metrics

Free Energy: -40.55

Frequency: 0.0002

Diversity: 33.67

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((........)).)(((((((...........(((((((.......(((((((.((((.(....(((....)))....).)))))))))))..............................................................(((((.(.((...........)).))))))............(((.((((((....)))))).))).......)))))))........)))))))

Thermodynamic Ensemble Prediction

(.((,......,)).)(((((((.......,{{,(((((({.......(((((((.((((.(....(({....})).,..),)))})))))))..............................................................((((,,(.((..,........)).))))))............(((.((((((....)))))).))).......))))))).}......)))))))