Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACTN4_0001700

Sequence Length

250 nt

GC Content

0.3800

GCGUGAGCCACUGCGCCCGGUGUGAUUAUUUUUAUGAAGGAAAAGACCAGAGUCCUUUAAGAGGGGACAGUGGGGGACUUGCAAUAGAUUGUGUGGGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCUUAUGCUGCACUUGGGAGGGAGACUGGUUAUGAACAAAGAACAUAGUUUUUGAUGAUGAAAAGUGCAGUGAGUAAAACAAUGCAGUGUGAGGCCGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.50 kcal/mol

Ensemble Metrics

Free Energy: -55.55

Frequency: 0.0003

Diversity: 39.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((........))))(((((((((......))))...........(((..(((((((...)))))))..)))....((((((....(((((((....))....................................................((((..(((((((((.....(((((((((((.(......).))).)))))))).........)))))))))))))...)))))....)))))))))))

Thermodynamic Ensemble Prediction

((((,......}))))(((((.(.{{..{{{{{......,}},,..(((..(((((({...}))))))..)))....((((((.......,)})),).,}....................................................((((..(((((((((.....(((((((((((.(......}.})).)))))))).........)))))))))))))...,|,.,...,})).).)))))