Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACTN4_0006300

Sequence Length

192 nt

GC Content

0.6146

GACCGUGUGCCCCAAAAGACUAUCCAGGAGAUGCAGCAGAAGCUGGAGGACUUCCGCGACUACCGGCGUGUGCACAAGCCGCCCAAGGUGCAGGAGAAGUGCCAGCUGGAGAUCAACUUCAACACGCUGCAGACCAAGCUGCGCCUCAGCAACCGGCCCGCCUUCAUGCCCUCCGAGGGCAAGAUGGUCUCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.40 kcal/mol

Ensemble Metrics

Free Energy: -62.60

Frequency: 0.0011

Diversity: 51.71

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((.((..................((...((((((...((((((...(((((..(...((((((((.((......))))))...))))..)..))))).))))))((((.....)))).....))))))..))..((((.....)))).))))))(.(((.((.((((((...)))))).)).)))...)

Thermodynamic Ensemble Prediction

(.(((.{(((............,,..((,{.(,((((....||||,,...||||},,,..,...((((.({......))))))..{(((((((......{{||(((((,,({....,,))..}}.)))))).......))))))))..))},})))}|,(((.((.((((((...)))))).)).)))...)