Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACTN4_0008600

Sequence Length

225 nt

GC Content

0.5778

AAGCAGACAGGCAGCAUGGACUCCGAUGACUUCAGGGCUCUGCUUAUCUCCACAGGAUACAGCCUGGGUGAGGCCGAGUUCAACCGCAUCAUGAGCCUGGUCGACCCCAACCAUAGCGGCCUUGUGACCUUCCAAGCCUUCAUCGACUUCAUGUCGCGGGAGACCACCGACACGGACACGGCUGACCAGGUCAUCGCUUCCUUCAAGGUCUUAGCAGGGGACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.40 kcal/mol

Ensemble Metrics

Free Energy: -67.42

Frequency: 0.0015

Diversity: 80.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((....((.((......))))..)).)))(..(.(((((((..((.((.((((......)))))).))(((((.(((((.........))))).)))))((((........((((.....(((((((....((((....(((......(((((..((...))..))))))))....))))....)))))))))))........))))..)))))))..)..)

Thermodynamic Ensemble Prediction

((((.(({.((((((.,((.{((,({{{.,....((((((.(((,.((.((.((((......)))))).))})).))))))....,}}}}.,))))}|(({|,.,{,,..,,...|,({||{{(,((,,,.,}}||||.....{(,,,,,.{||||.|||.,.)).,}}}}}})),..,))))}.},,}))),,.)))){.,,...,|||{{.....))))),.)