Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD11_0001500

Sequence Length

375 nt

GC Content

0.6107

AGAAGCAGGGCCCUGAGCGGAAGAGGAUUAAGAAGGAGCCUGUCACCCGGAAGGCCGGGCUGCUGUUUGGCAUGGGGCUGUCUGGAAUCCGAGCCGGCUACCCCCUCUCCGAGCGCCAGCAGGUGGCCCUUCUCAUGCAGAUGACGGCCGAGGAGUCUGCCAACAGCCCAGUGGACACAACACCAAAGCACCCCUCCCAGUCUACAGUGUGUCAGAAGGGAACGCCCAACUCUGCCUCAAAAACCAAAGAUAAAGUGAACAAGAGAAACGAGCGUGGAGAGACCCGCCUGCACCGAGCCGCCAUCCGCGGGGACGCCCGGCGCAUCAAAGAGCUCAUCAGCGAGGGGGCAGACGUCAACGUCAAGGACUUCGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-115.40 kcal/mol

Ensemble Metrics

Free Energy: -122.53

Frequency: 0.0000

Diversity: 133.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((..(((((((.........)))....((((((.(((.....(((((....)))))(((((((((((...((((.((.((((........)))).)).))))...))))))...)))))..)))))))))...((((((..(......)..)))))).....)))).(((.......)))....((.((((((....((((((...))).))).(((....)))..((((...(((................)))...))))....((((((((......)))).(((.(((.(((.((......)).)..)).))).))).......))))......)))))))).((((....)))).....))))....

Thermodynamic Ensemble Prediction

.{{(((.{({((((..,{.{,.,|{,.,,.,{{{{{.((({{{,.(((((..,,})))|{(({{(({{((...((((.{(.((((........))))},,|)))|,,.)))}}||||.|{{(((({||{|{(({.,((((((..(......)..)))))).....||,,.,(({......,,}....||.{.||||,,.}|||,,..}}))),}}}.))).{{{{|,..((((...(({................)))...))))....}.)})),}}},,..))))))))...,,|||||,.,,|}|}}{|.,,}}})))}}.},...,.|))}.}|.}|||})))}}.((((....))))...,.)))),,..