Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD11_0004900

Sequence Length

250 nt

GC Content

0.4560

UUGCACCAUUAUAUGUUCCCACCAGCAAUGCACGAGGAUUCCUGUUUCUCCACAAGCUCACCUGCCCCCUGGUUCCCUGUGAGGUGCUGGAGACUGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGAGCAGGACGAUGCCCAAGGGUGGGUGCCCUAAAGCACCACAGCAGGAAGAGCUUCCCCUCAGCAGCGACAUGGUGGAGAAGCAGACUGGGAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.80 kcal/mol

Ensemble Metrics

Free Energy: -62.11

Frequency: 0.0046

Diversity: 37.97

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.....(((((((((((....(((..((((....(((((((((((..(.(((((..(((....))).....))))).)..))))))..)))))....................................................((.(((......)))))...(.(((((((......))))).)).).((((....)))))))).)))......)))))).).))))...))).......

Thermodynamic Ensemble Prediction

.....(((.....(((((((((((,,..(((..((((..,,(((((((((({..{.(((((..(((....))).....))))).}|,|}}}}}..))))}..................................................,,||,|||,,....}}||}...|,(((((((......))))).)}.}.((((....)))))))).)))..,.,.)))))).)))}))...))).......