Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD11_0005600

Sequence Length

250 nt

GC Content

0.4120

GCUGAGGCAGGAGAAUAGCUUGAACCCAGCAGGUGGAAGUUGCAGUGAGCUGAGAUCAUGCCACUGCACUCCAGCCUGGGUGACGGAACAAGAGUCUGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUUUUUUUUUUUUUUUUUUGAGACUGAGUGUUGCUCUUUGCUGCCCAGGCUGGAGGGCAGUGGCGUGAUCUUGGCUCACUGCAACCUCAGCUUCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-102.42 kcal/mol

Ensemble Metrics

Free Energy: -104.72

Frequency: 0.0239

Diversity: 27.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((((((.......))))..))))))..(.(((((((((((((((((((((((((((((((((.(((((((((((((((.(.((((..(((((...........................................................................)))))...)))).)))......))))))))))))).)))))))))))))))))))))))))))......)))))))..

Thermodynamic Ensemble Prediction

((((.(({{{(,,.....)))}..))))))..(.(((((((((((((((((((((((((((((((((.((((((((((((((,{({({({..(((((...........................................................................))))),,.}}}},))),,,}.,))))))))))))).))))))))))))))))))))))))))),,...,)))))))..