Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD11_0006000

Sequence Length

425 nt

GC Content

0.4635

GGCCUCGGUGCAGAUGCGAUUGUCAGGCUGCGCUCAGUAACACAAGACCUGCCCUCGACGGGUGGAUGCUCAUAACAAGAUGAAGUUCAAGUGAGCAUCUUUGGGUUUUUUCUUGUUUUACUUAUUAAUGGAAGAAACCCUUUAUUUUUAAGAGACCUUCUUUUGAUCCUGGCGAUACUGUGACAUUUCAGUCUAUUUUUGAGUUGGUUGUGAUACUCGAUGUCUGGGGCCGUCCCUGCUGGAAGAGAGAGCGUUCAGAGCAGAGCAUGUGCCGGACAUGGGGCCACGUUCACCCCUGAGGAGCACUUUGAAAUGGCUUUGAAUUCUUGUCAGCCUUGAUUAGGUCUUUCAGGCAAACAGUCUGGCUGAUGAAAAGUUUAUGGUACAAGCAGCAGAAACUUAAUCAGCUCUUCUGUUCUGCCAUC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-126.20 kcal/mol

Ensemble Metrics

Free Energy: -134.49

Frequency: 0.0000

Diversity: 140.13

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((.(((......(((((((((.(((.....)))...........((((.....))))(((((((((((((........)))...))))))))))..(((((((((((................))))))))))).......((((((((...)))))))).)))))))))((((........))))......((((((..........)))))))))))))))))(.....((.((((.((((((((((((((((....((.((((....((.((((.........))))))....))))..)).....)))))))))..(((((((((..((((..((((...))))....)))).))))))))).((((((.((.(......).)).)))))).....)))).))).))))))...)

Thermodynamic Ensemble Prediction

((((({(({(({{..||,{|{|{{||{||{|,,.{||.,.....,,{{{{(({{....,))))(((((((((((((........)))...))))))))))..(((((((((((.............,..))))))))))).......{{((((((...})))))}|.|}}|||||},,,,,{{{{.{{{{|}|..,,,({{(({,{{.{{{{..,|||,|{{{||||,||}(,,.{{(({,(((,,{,,,,|,|||,,|||}}.,,|.||,|}}}}||},|||.}}},.,,,}}}))},,),)}}}.,}),,,}}}}}}})}},..|}|||||||..|||,}))}}}},,}|||,,{{{|,,.|((((((...((((({.((.(......}.)).}))))).))))))),..)))))})))}..)