Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD12_0005200

Sequence Length

237 nt

GC Content

0.3797

AGAAACCAUAUGGAAGAAAGAGUAAAGACAAGAUUGCAUCCUACAGCAAAACUCCAAAAAUUGAACGAAGUGAUGUGAGCAAGGAGAUGAAAGAGAAAUCAUCCAUGAAACGUAAACUUCCUUUUACUAUUAGCCCAUCAAGAAAUGAAGAACGAGAUUCAGACACAGAUUCAGAUCCAGGACAUACAAGUGAAAAUUGGGGGGAGAGACUUAUAUCUUCUUACAGGACAUACUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-28.30 kcal/mol

Ensemble Metrics

Free Energy: -32.67

Frequency: 0.0008

Diversity: 47.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((....))......(((((.........((((........))))..((((((.........(((((.((((...((.((((((.........))).))).))..))))..))))).(((((((..(((.(((((......((((........))))......))).........)).).))..))))))).))))))(((((........)))))..........)))))..

Thermodynamic Ensemble Prediction

.....((....))......(((((.........((((........))))..,{{{,......,...(((((.((((...((.((((((.........})).))).))..))))..))))).{{{{{{{..,,,.{{{{{..,...((((........}}}}......,,}}}...}}..)).,.},..})))}},.|||,|((((((........))))))..}}}....)))))..