Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD36_0016500

Sequence Length

408 nt

GC Content

0.4020

UGUCUUCUCGGAAAAAACCAGCCUUGAAGGCUACAAGUGAUGAGAAGGAUUCUUUUUCGAAUAUAACCAGAGGAAAAAAGGAUGGAGAAAUAUCUAGGAAAGUGUCUUCUCAGAAACCACCAACCUUGAAGGGUACAAGUGACGAGGAAGAUUCUGUUUUGGGUAUAGCCAGAGAAAACAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUGAGAAACCACCAGGCUUGAAGGCUUCAAGUGCCGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGGAUGGAGAAAAAACUAAGAGAGUGUCUUCUCGGAAAAAACCAUCCUUGGAGGCCACAAGUGAUGAGAAGGAUUCUUUUUCGAAUAUAACCAGAGAAAAAAAGGAUGGAGAAAUAUCUAGGAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-92.70 kcal/mol

Ensemble Metrics

Free Energy: -100.66

Frequency: 0.0000

Diversity: 122.07

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((((((........((((((.(((.((....((..(((((((.((.((((((...((((..(((.............)))....))))...)))))).)))))))))...))(((..((((....))))....))).(..(((((((.(((((((((((.(..(((.............)))..)...))))))))))).)))))))..)........)).))).)))))).......))))).))))).((.(((((.((((..(((.............(((..........((((((((.(((((((((......))(((((((.......)))).))))))))))))))))))..........))).............)))....)))).))))).))

Thermodynamic Ensemble Prediction

.,(((((((({........(((((...})))).....,..||||||||{|{(((((((,.......{,...,|....,,{{{(({,....,,))}.,{{,,{.{||{{{{{{...,,......((({.{{||||....{|,.{..(((((((.(((((((((((.{..(((.............)))..,...))))))))))).)))))))..)..,,},}..,((((({|..,))))))).((((({{{(((.((.(((((.......(((.............))).........})))).)).})))))))))......,,)))))).},,,,,.,..))..)))))))))}})))))}|........,}.,,,,......,,,|||,....}}))),,,,.,}