Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD36_0018800

Sequence Length

612 nt

GC Content

0.4069

UGUCUUCUGAGAAACCACCAGGCUUGAAGGCUUCAAGUGCCGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGGAUGGAGAAAAAACUAAGAGAGUGUCUUCUCGGAAAAAACCAUCCUUGGAGGCCACAAGUGAUGAGAAGGAUUCUUUUUCGAAUAUAACCAGAGAAAAAAAGGAUGGAGAAAUAUCUAGGAAAGUGUCUUCUCAGAAACCACCAGCCUUGAAGGGUACAAGUGACGAGGAAGAUUCUGUUUUGGGUAUAGCCAGAGAAAACAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUGAGAAACCACCAGGCUUGAAGGCUACAAGUGAUGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGGAUGGAGAAAAAACUAGGACAGUGUCUUCUCAGAAACCACCAACCUUGAAGGCUACAAGUGAUGAGGAAGAUUCUGUUUUGAGUAUAGCCAGAGAAAACAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUGAGAAACCAUCAGGCUUGAAGGCUACAAGUGCCGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGUAUGGAGAAAAAACUAAGAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-148.90 kcal/mol

Ensemble Metrics

Free Energy: -158.56

Frequency: 0.0000

Diversity: 142.33

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((.........(((((((((.((.(((.....(((((((.(((.((.(((((.......(((.............))).........))))).)).))))))))))........((((((.(((((.....((..(((((((.((.((((((...((((..(((.............)))....))))...)))))).)))))))))...)).....))))).))))))...........(((((((.(((((((((((.(..(((.............(((.......((.(((((((.(((((((.....((....((.(((.((((......((..((((((.(((.((((((((.......(((.............))).........)))))))).)))))))))...))......)))).))).))....)).....))))))).)))))))))......))).............)))..)...))))))))))).)))))))..))).)).)))))))))..(((.......))).......((((......)))).....)))))))........(((........)))......

Thermodynamic Ensemble Prediction

..(((((((.........{{{(((((,{(,{((({{{{.(((((((((((.((.(((((.......(((.............))).........})))).)).))))))))))........((((((.(((((.....((..((((((((((.((((((,..,{,,..{{{.............}|}....,)))},.}))))).}))))))))...)).....))))).))))))....{{..(..(((((((.(((((((((((.{..(((.............|||..,...}||}|||||||.|||||||..}..||....{(.(((.((((.,....((..(((({{{(((.((((((((.......(((.............))).........)))))))).)))))))))...}}......)))).))).))....)}..,..|||||||.|||||||||......|||.............)))..,...}))}))))))).)))))))..),,.)}.}}}}))))),}|{|,.,,,,.}}}.,|,..,||{(|.,,,,},,,....|))))))}........|||........))).,,...