Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD36_0020100

Sequence Length

918 nt

GC Content

0.4096

UGUCUUCUCGGAAAAAACCAUCCUUGGAGGCCACAAGUGAUGAGAAGGAUUCUUUUUCGAAUAUAACCAGAGAAAAAAAGGAUGGAGAAAUAUCUAGGAAAGUGUCUUCUCAGAAACCACCAGCCUUGAAGGGUACAAGUGACGAGGAAGAUUCUGUUUUGGGUAUAGCCAGAGAAAACAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUGAGAAACCACCAGGCUUGAAGGCUACAAGUGAUGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGGAUGGAGAAAAAACUAGGACAGUGUCUUCUCAGAAACCACCAACCUUGAAGGCUACAAGUGAUGAGGAAGAUUCUGUUUUGAGUAUAGCCAGAGAAAACAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUGAGAAACCAUCAGGCUUGAAGGCUACAAGUGCCGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGUAUGGAGAAAAAACUAAGAGAGUGUCUUCUCGGAAAAAACCAGCCUUGAAGGCUACAAGUGACGAGAAAGAUUCUGUUUUGUAUAUAGCCAGAGAAAAAAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUCCGAAACAACCAGCAUUGAAGGCUAUCUGUGACAAGGAAGAUUCUGUUCCGAAUAUGGCCACGGAAAAAAAGGAUGAACAAAUAUCUGGGACAGUGUCUUGUCAGAAACAACCAGCCUUGAAGGCUACAAGUGACAAGAAAGAUUCUGUUUCGAAUAUACCCACAGAAAUAAAGGAUGGACAACAAUCUGGAACAGUGUCUUCUCAGAAACAACCGGCCUGGAAGGCUACAAGUGUCAAGAAAGAUUCUGUUUCGAAUAUAGCCACAGAAAUAAAGGAUGGACAAAUACGUGGGACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-228.30 kcal/mol

Ensemble Metrics

Free Energy: -246.86

Frequency: 0.0000

Diversity: 250.85

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((((.........((((((.(((((.....((..(((((((.((.((((((...((((..(((.............)))....))))...)))))).)))))))))...)).....))))).))))))....((..(..(((((((.(((((((((((.(..(((.............(((.......((.(((((((.(((((((.....((....((.(((.((((......((..((((((.(((.((((((((.......(((.............))).........)))))))).)))))))))...))......)))).))).))....)).....))))))).)))))))))......))).............)))..)...))))))))))).)))))))..)..))....((.(((.((((((.......(((((((.(((.((.(((((.......(((.............))).........))))).)).))))))))))........)))))).))).))........)))).))))).(((((((((((....(((.............(((.......((..((((((.(((((((..((.((....(((.....(((((...(((.....(((((((.((((((((.((.((.(((.............((.....((((.((((((((..((((((((.........(((((...))))).....))))))))......)))))))).)))).....))...........))).))...)).)))))))).))))))).....)))...))))).....)))....)).)).)).))))).)))))).))......))).............)))....)))))..))))))

Thermodynamic Ensemble Prediction

.(((((((((..,......((((((.(((((.....((..((((((((((.((((((,..,{,,..{{{.............}|}....,)))},.}))))).}))))))))...)).....))))).)))))).....}..))}||||))}.((((((((((({(,.{({..........,,,({{......,|||{((((((.(((((((..,..{{....((.(((.((((......((..(((({{{(((.((((((((.......(((.............))).........)))))))).)))))))))...))......)))).))).))....))..,..))))))).))))))}},...,..|||.............|||{,{....}},,|{{{{,{|||||||{{....,,.}}||.{((.((((((.......(((((((((((.((.(((((.......(((.............))).........})))).)).))))))))))........)))))).))|{||{,,.,,,{{{{((,,|,},||||||||},,.,,}||,..........,{,|||......,))}}))))),}))))))))}|..,{....{{{.{{.,(((((...(((,,{..{{{((((.((((((((.{{,({.,({{..........}.|}..,..|}}).}|||||||.}||||||||...,,....|||||}.,)})))....,}}}},}||...,},)))))))}..}}}.,|||,.........{{,{|,....,.,))}|||||||.|||||||..{,.||....|||||...}))))....}}.}}.})}}}))).))))))),.......||||............}}}....}}}}}))))))))