Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD36_0022200

Sequence Length

408 nt

GC Content

0.3971

GCUACAAGUGAUGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGGAUGGAGAAAAAACUAGGACAGUGUCUUCUCAGAAACCACCAACCUUGAAGGCUACAAGUGAUGAGGAAGAUUCUGUUUUGAGUAUAGCCAGAGAAAACAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUGAGAAACCAUCAGGCUUGAAGGCUACAAGUGCCGAGAAAGAUUCUGUUUUGAAUAUAGCCAGAGGAAAAAAGUAUGGAGAAAAAACUAAGAGAGUGUCUUCUCGGAAAAAACCAGCCUUGAAGGCUACAAGUGACGAGAAAGAUUCUGUUUUGUAUAUAGCCAGAGAAAAAAAGGAUGGAGAAAAAUCUAGGACAGUGUCUUCUCCGAAACAACCAGCAUUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-92.40 kcal/mol

Ensemble Metrics

Free Energy: -99.86

Frequency: 0.0000

Diversity: 75.06

Structure Visualization

Structure Prediction

MFE Structure Prediction

(......((..((((((.(((.((((((((.......(((.............))).........)))))))).)))))))))...))......)(((.((.(((....((..((.(((((((.(((((((((......(((.............(((.........((((((((.(((((((.....((....((.(((.((((((.......(((((((.(((.((.(((((.......(((.............))).........))))).)).))))))))))........)))))).))).))....))....)).))))).)))))))).......))).............))).......)).))))))).))))))).))..))....))).)).)))

Thermodynamic Ensemble Prediction

(((....((..(((({{{(((.((((((((.......(((.............))).........)))))))).)))))))))...))......|((((.((.((.(((((,,((.(((((((.(((((((((......(((.............))).......)},})))))).))))))).......,,))|.,)))).)),)}.))))..(((((((((((.((.(((((.......(((.............))).........})))).)).))))))))))........)))(((.(|.(((....((..{((({{{(((.((((((({.,,.,..(((.............)))......,},}))))))).)))))))},}..))....))).)).)))