Sequence Details

BLAST PRIMER
Symbol
hsa_ANKS1A_0002200
Sequence Length
360 nt
GC Content
0.5361
AAUGCUCUUGAGAUCAAAGAACUCAAAAAGUACGGCCCCUUUGACCCUUAUAUCAAUGCCAAGAACAAUGACAACGAGACAGCCCUGCAUUGUGCAGCGCAGUAUGGCCACACAGAGGUGGUGAAGGUGCUCUUAGAGGAGCUGACGGACCCCACCAUGCGCAACAACAAAUUCGAGACCCCUUUGGACCUGGCAGCACUGUACGGGCGACUGGAGGUGGUGAAAAUGCUCCUUAAUGCACACCCCAACCUCCUGAGCUGCAACACUAAGAAGCACACCCCUCUGCACUUGGCAGCAAGGAAUGGCCACAAAGCCGUGGUCCAGGUCCUCCUCGAUGCUGGCAUGGACAGCAACUACCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-96.10 kcal/mol
Ensemble Metrics
Free Energy: -103.06
Frequency: 0.0000
Diversity: 108.70
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((.(((((.((...)).)))))...((.((((.(((((((..(((...(((.((.......)).)))....)))......(((((...))))).(((.(.(.(((((......))))).).).)))..))))))).))))))((...)).((((((.((.((......(((((........((((((((.(.((((((...(((....((((((((((....(((........)))))))...))))))...)))...)))..............(((((((.....))))..)))...(((......)))))).)))))))))..))))))).))))))))..))))........
Thermodynamic Ensemble Prediction
..((((.(((((.((...)).)))))...{{.((((.{((((((..,,....|||.,{,,.....||,||.,,.,,,,.,.{{.{{{||,,,))))).||.,|.{.(((({.,...,|}|||.,.,}||||{|||}})).))}}}}{{...|}.((((((,({.,,......(((((........((((((((,{,{{{,|{..,||{..,.((((((((((....(((........)))))))...))))))...)}},|....,,,,}.,}},,,,,||||||{...,,))})..|}|,.,((({,,...}},))),})))))))),.)))))))|||))))))..))))........
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