Sequence Details

BLAST PRIMER
Symbol
hsa_ANKS1A_0010300
Sequence Length
517 nt
GC Content
0.5764
AACCUGACCUACGAGAUCAUCCUGACGCUGGGGCAGGCCUUCGAAGUGGCCUAUCAGUUGGCCCUGCAGGCCCAGAAGUCCAGGGCGACGGGCGCCUCUGCAGCUGAGAUGAUUGAAACAAAAUCUUCCAAACCGGUGCCUAAGCCUCGGGUCGGCGUGAGGAAAUCCGCACUGGAACCACCUGAUAUGGACCAAGAUGCCCAAUCCCAUGCCAGUGUCUCCUGGGUUGUGGACCCCAAACCAGACUCUAAGCGGAGCCUCAGCACCAAGUAUGAGACCACUAUCUUCUAAAACAACCCACUCCCUGUCUCCACUAGUCUCACUGUGCCUUUGCCAUCCGAUCUUUCUGCUGUCCUCAACUCUCUCCUUCCAGCUGCUGAUGCCAAGGCCCCACCUGCACUGGGACCUGCUCCUCUUGGGCGGGCGGCAGCGUAGACGCUGUACACUUGCAGCUCUCGCACCUACCACCACCGAACACUGUGAAUUCUCCCCCUUGGGCUGAGGACAGCUUGAGGGG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-163.45 kcal/mol
Ensemble Metrics
Free Energy: -171.50
Frequency: 0.0000
Diversity: 173.11
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((.((((.(((..............((((((((((........)))))........)))))((((((((((.......((((....((((..((.(((((((.((.((((.......)))).))....(((((((.....(((((.(....).)))))......)))))))....(((((.(((((.....(((.....)))))))).))).)).....((((((.((((.......((((.......((((((....((((..(((..(((((......................................))))))))))))....))..)))).....))))..)))).))))))........))))))).))))))...))))........))))).)))))..))).)))))))).((..(((.(((.((((((....)))))))))))).))......(((........))).......((((((((((((....))))))))))))
Thermodynamic Ensemble Prediction
..(((({((((.((({,({,..,{{{.{{((((((((((........))))}....{,,||||||(,,(((,,,,..|}}}}||||,,,{(((({{,,.{,,{,{(,((.((((.......}))).)}....,,|||||}}..))|||}}}}}{{{{||,(({.....{(||{{(..{((...,.,,|||.}},.|.}}}....))))))))),)}))}}}.}||||||.||,({{{.....,,,.,,.,{{({{{{(,,,,(({(,,((...(((({.,.......,..................}.........}}}}}))})))|,,..}}..}}}}.....}},|{{||||.}},,,,......,,}}}}|||.}}}}|,...))}},,...},,))))).|||||.({....))))))).((..(((.(((.((((((....)))))))))))).}}...,..{,,.},.....)))...,,,}{{,|||||||||}}}.}}))))))))))
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