Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_APP_0011000

Sequence Length

156 nt

GC Content

0.5449

GAGGAAGAAGUGGCUGAGGUGGAAGAAGAAGAAGCCGAUGAUGACGAGGACGAUGAGGAUGGUGAUGAGGUAGAGGAAGAGGCUGAGGAACCCUACGAAGAAGCCACAGAGAGAACCACCAGCAUUGCCACCACCACCACCACCACCACAGAGUCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-30.40 kcal/mol

Ensemble Metrics

Free Energy: -33.54

Frequency: 0.0061

Diversity: 12.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(..(....(((((.................)))))....)..)..((((..((.((.(((((.((.(((.(.((.....((((.((..(.((.(............))).)..))..))))....)).).)))..)).))))))).))..))))

Thermodynamic Ensemble Prediction

..(..(....(((((....,............))))).,..)..)..((((..((.((.(((((.((.(((.(.((..{,.((((.((..,.((.{............,}).}..})..)))).,,.)).}.)))..)).))))))).))..))))