Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_APP_0011200

Sequence Length

150 nt

GC Content

0.5200

GAUGACUCGGAUGUCUGGUGGGGCGGAGCAGACACAGACUAUGCAGAUGGGAGUGAAGACAAAGUAGUAGAAGUAGCAGAGGAGGAAGAAGUGGCUGAGGUGGAAGAAGAAGAAGCCGAUGAUGACGAGGACGAUGAGGAUGGUGAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-14.70 kcal/mol

Ensemble Metrics

Free Energy: -18.93

Frequency: 0.0010

Diversity: 30.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((...((((((.(.......).))))))....((((....))))..((....))...............................(((((.................)))))...((.((.(...(.....)..).)).)))))

Thermodynamic Ensemble Prediction

.....(((,..((((((.(.......).)))))}|..,((((.,..||,|..,{....,}......,|.......,,......,.......(((((....,............))))}....|..|....,{.||..,.}).))..})))