Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ASTN1_0001500

Sequence Length

285 nt

GC Content

0.5474

GUUCACGCUGUGGGGAGUGGACAACACAGGACGGCGCUCCAGGCCAAGCGACGUGAUCGUGAAGACCCCAUGCCCCGUGGUGGAUGAUGUCAAGGCUCAAGAAAUAGCAGACAAGAUCUACAAUCUCUUCAAUGGCUACACUAGUGGGAAGGAGCAGCAGACCGCCUACAACACCCUCCUGGAUCUGGGUUCCCCCACCUUACACCGGGUCCUCUACCACUAUAACCAGCACUAUGAGAGUUUUGGGGAAUUCACCUGGCGAUGUGAGGAUGAGUUAGGUCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.40 kcal/mol

Ensemble Metrics

Free Energy: -83.89

Frequency: 0.0001

Diversity: 101.84

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((((.(((..((..(((((..(.......)..).))))..))..))).))))).).((..((((.....(((((..((((((..((((...(((........))).))))..))))))...(((((.....(((....((((((..(((((..((.....))..........)))))((((((((((...........)).))))))))....)))))).....))).....)))))...)))))(((((((((.((...)).))).)))))).)))).)).

Thermodynamic Ensemble Prediction

({((({{.,{{{{((.(((,....,...{{.,,{{{{|||...||,.}}}.}|||,,|{(((({{,,{(({{,..}}}}((((((..((((...(((........))).))))..))))))...,|||||,.,||{|.,..{{{|||..,||||}.||.,.,,},........,,)))))||||(((((,.,,.,{{{{{,||{||||||}},...||}|||.....|,}....}),}})}..})))),.,,,))||||...|))|))).}).},,.})})))))