Sequence Details

BLAST PRIMER
Symbol
hsa_ATRNL1_0015100
Sequence Length
240 nt
GC Content
0.3833
GACUAUUUUGAAAGAAAGUGGGUUUGCCAGAUACCUUCAUUCAGCUGUUCUUAUCAAUGGAGCUAUGCUUAUUUUUGGAGGAAAUACCCAUAAUGACACUUCCUUGAGUAACGGUGCAAAAUGUUUUUCUGCCGAUUUCCUGGCAUAUGACAUAGCUUGUGAUGAAUGGAAAAUACUACCAAAACCAAAUCUUCAUAGAGAUGUCAACAGAUUUGGACACUCUGCAGUAGUCAUUAACGG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-47.70 kcal/mol
Ensemble Metrics
Free Energy: -51.55
Frequency: 0.0019
Diversity: 85.42
Structure Visualization
Structure Prediction
MFE Structure Prediction
(.(((((((.....)))))))............((((((...(((.(((((.......)))))...)))......)))))).....)((.((((((((((.(...((((....((.((((.(((.....(((((......)))))..((((((..((.((((.((.(((...............)))..)).))))))..)))))))))..)))).)))))).).))).)))))))..))
Thermodynamic Ensemble Prediction
(,((((({(,...{|||||{(.,,{,..,{.,.,{(((({{,((({((({{..,,,,.||||}..,|}|{{{{..|||,|}.....)||,{|||||||{|,|,,,||{{,,,,||,(((,,((({....(((((......)))))...|||||..{||||{{,||,|||,.....,,..,,,..)))..)),)))|||,,}||||}}}}..,})),)))))),}.))),)))}}},..}}
Back