Sequence Details

BLAST PRIMER
Symbol
hsa_ATRNL1_0017700
Sequence Length
250 nt
GC Content
0.2920
GAUGAAUAAAGAUAAAAAUUAUAUCUGGGUACUUUUUAUCUGCUACUUUACAGUAAGUGUAAAAUGCUCUAAUAGAAAUUAACACCUUUGGAAUGGAGGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAUGUGUGCGAACAGUGUAAAAAUCUCACCACAGGAAAGCAGUGUCAAGAUUGUAUGCCAGGUUAUUAUGGAGAUCCAACCAAUGGUGGACAGUGCACAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-31.50 kcal/mol
Ensemble Metrics
Free Energy: -35.45
Frequency: 0.0016
Diversity: 54.93
Structure Visualization
Structure Prediction
MFE Structure Prediction
.........(((((((((.(((......))).)))))))))((...((((((.....))))))..))................((((((.....))))))....................................................(((......)))(((((....((.(((((..((...(((((......)))))...)).(((.....(((....))))))..)))))))...)))))..
Thermodynamic Ensemble Prediction
.........(((((((((.(((......))).)))))))))((...((((((.....))))))..)),,{...,,,.......((((((.....))))))....................................................|,((({,..}||,(((,....{(,{{{{{..{{...{({{(,.....)))}}..,||,{({.....{((....)))}))..}))))}),,,))))),.
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