Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ATRNL1_0018400

Sequence Length

167 nt

GC Content

0.3952

UUUGUCCAUUGAAACAUAUGCCUCUAUUGCUGUGAUUGGCUGGGACUCAACUAUCUGUUACAAGAAUAUGCUUCUUGUACAUGCAGUGGCCAUGCAAAUAUCUGUCAUCUGCACACAGGAAAAUGUUUCUGCACAACUAAAGGAAUAAAAGGUGACCAAUGCCAAUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-26.70 kcal/mol

Ensemble Metrics

Free Energy: -31.31

Frequency: 0.0006

Diversity: 60.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..(((...(((((((..((...((((..((((((.((.(((.......))))).))))))..)))).))(((((((...(((((((((.............)))).))))).))))))).)))))))............)))..))(((((.......)))..))

Thermodynamic Ensemble Prediction

{({(({(.,,(({{(({..,(({...,({(,{{(((,{((,{({.,....{{.,{(({{(((((((.....)))))))),,,|{||||||,,.},........)))),}}))).,,)))...})))))).,..........))},})}}{{|{{......}})}.})