Sequence Details

BLAST PRIMER
Symbol
hsa_ATXN10_0002000
Sequence Length
250 nt
GC Content
0.3640
AGAAACAGCACCCAGGACUAUCUUCCAAAGAGUUCUGGAUAUCCUAAAGAAAUCUUCUCAUGCUGUUGAGCUUGCCUGCAGAGAUCCAUCCCAAGUGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCAGGAACAAGGCAAGAAUUUCUGCUCUCACCACUCCAGUAAACAACGUGCUGAAGGUCCAGAGCAACUCACUAAGCCAAGAAAAAUCAGAUGCAUGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-40.40 kcal/mol
Ensemble Metrics
Free Energy: -44.77
Frequency: 0.0008
Diversity: 16.63
Structure Visualization
Structure Prediction
MFE Structure Prediction
...(((((((.(((((((..((((...))))))))))).........((((...))))..)))))))....((((.((((..(((((((.....))))..............................................................(((.........((((((.(((....(((((.......)))))..)))..)))))).........))).......)))...)))).))))
Thermodynamic Ensemble Prediction
...(((((((.((((((({.,((,...})))))))))).........(((,...})))..)))))))...{{(((.((((..{,(((((.....))))).............................................................(((.........((((((.{{(.,{.(((((.......))))).,))}..)))))).........)))........})...)))).))))
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