Sequence Details

BLAST PRIMER
Symbol
hsa_ATXN10_0005100
Sequence Length
287 nt
GC Content
0.4599
CUUUUCGCUGUGGCCUGCAGUUUUUAGGCAACAUUGCCUCACGGAAUGAAGAUUCCCAGUCUAUUGUUUGGGUGCAUGCUUUCCCAGAACUGUUUUUGUUCUUGAUUAUUACAGACCUCUUUCUGAAAAGCCCGGAAUUGGUACAAGCCAUGUUUCCCAAACUGAACAAUCAAGAAAGGAGGCACUGGCUACAAUUAGGCUUCUCGACGUCCUGUGCGAAAUGACUGUGAAUACUGAGCUGCUCGGCUAUCUGCAGGUUUUCCCUGGCUUGCUGGAAAGAGUGAUUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-73.00 kcal/mol
Ensemble Metrics
Free Energy: -79.62
Frequency: 0.0000
Diversity: 73.83
Structure Visualization
Structure Prediction
MFE Structure Prediction
....(((((((((((.(((((((..(((((....)))))...(((((....)))))(((((........(((..........)))(((((.......))))).........((((......))))..(((((...(((((.....((((((((((((.....(((....))).....))))))).))))).))))).))))).(((((.....)).)))...)))))........)))))))..))))))..(((((((......))))))).......)))))...
Thermodynamic Ensemble Prediction
....(((({{(((((.(((((((..(((((....)))))...(((((....)))))(((((..,,{{{((((.{,,,,,,,.}}|(((((.......))))}.,......,{{(({.....||||,.,{{{{,,,||{{|}|...||{{||||{{||,,,,}(((....))).....}|||||},||}}}.}}})),))))),||||{|,..})},))}.,.)))))........)))))))..)))))}{,(((((((......))))))).)),.,.)))))...
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