Sequence Details

BLAST PRIMER
Symbol
hsa_ATXN10_0009700
Sequence Length
250 nt
GC Content
0.3760
CACGAACCAGCCCAUCCUCACUGAUAAGAGCCCCAGUGUGCGGAGUGGAUUCCUGAGCCAGUUAAAAGGUUGCUACAGCAGUGGAGGCCUGGUUGGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGAUCCUGAAAUCUACUAGAGACACCCCUAAGCCAUGAAUGAACUACAUCCAAAUACCUGAAUUUUUGGAAUCUGUUUCAUGGAUUUUUCAUCUUCUACC

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-40.60 kcal/mol
Ensemble Metrics
Free Energy: -44.88
Frequency: 0.0010
Diversity: 39.25
Structure Visualization
Structure Prediction
MFE Structure Prediction
(.(.((((((.((.(((..((((.....(((.(((.(......).))).......((((........)))))))....))))))))).)))))).).)((...................................................(((......)))...(((((...........(((((((...((....((((((..........))))))....)))))))))..........)))))))
Thermodynamic Ensemble Prediction
(.(.((((((.((.(((.{((((.....(((,,{{.{|.{{{{|,,|,..,}}..,|||,.,.....)))}}))....))))))))).)))))).).)((...................................................(((......}))...{{({(,.......,..((((((,..,((....((((((..........))))))....)))))))))..,.......,,}},))
Back