Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_BANP_0004000

Sequence Length

250 nt

GC Content

0.4440

CGUCGUCCCCCAGACUACAGUAAUACUCAACAAUGAUCGGCAGAACGCCAUUGUAGCCAAGAUGGAAGACCCCUUGAGCAACAGGGCACCGGAUUCCCUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCCUGCGCUCAAGCGAUCCGCCUGCCUCAGCCUCCCAAAGUGCUAGGAUUAUGGAUGUGAGCCACCACACCCAGCCUGCUUGUUUCUCAUCUGCUUGCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.70 kcal/mol

Ensemble Metrics

Free Energy: -47.58

Frequency: 0.0018

Diversity: 59.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((........)))..(((((.......((((((..((......)).))))))(((..((((((.((((.....(((((.(((((.........)))))..................................................(((((((((((.(((...))).))..............))))).))))...(((.((((......)))).)))...))))))))).))))))))))))))

Thermodynamic Ensemble Prediction

.(((........)))..(((((,......,,,,{{,..(({.....)|)}}|)|,((,,(({{((.{{{{..,,,{{({{.{{(((,...,,...}))))..................................................{((((((((,..({({..|||.,|....|||.|,....))))).)))}...{((.((((......)))).))}..,))))})))}.,))))}},})))))