Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_BANP_0005200

Sequence Length

240 nt

GC Content

0.6417

AGGACUACCCCAAUGGCACCUGGCUGGGCGACGAGAACAACCCCGAGAUGCGGGUACGCUGCGCCAUCAUCCCCUCCGACAUGCUGCACAUCAGCACCAACUGCCGCACGGCCGAGAAGAUGGCGCUCACGCUGCUGGACUACCUCUUCCACCGCGAGGUGCAGGCUGUGUCCAACCUCUCGGGGCAGGGCAAGCACGGGAAGAAGCAGCUGGACCCGCUCACCAUCUACGGCAUCCGGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-76.50 kcal/mol

Ensemble Metrics

Free Energy: -81.02

Frequency: 0.0006

Diversity: 54.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(..((.(((((...((.....)))))).)...))..).((((((((((((((((.....((((((((.((.(..(((...(((.(((.............))).))))))..).)).))))))))(((.((((((((....))((((((.(......((((..(((.(((((.........))))).)))..)))))))))))))))))))))))))).....)))).))).....)))

Thermodynamic Ensemble Prediction

,({.{{.{({,...||,.}}},||||||.{...}}..,.,,{(((((((((((((.....((((((((.((.{..(((...(((.(({.............})).))))))..).)).)))))))),{{.(((((({{....}}((((((.{{....,((((..(((.(((((.........))))).)))..))))}))))))))))))})})))))).....)))).))),.}}})))