Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_BBS2_0001300

Sequence Length

256 nt

GC Content

0.4180

GAAAACAAUGAAGAGUCGUUAUAUGGAACUCUAUGACCUUAAUAGAGACUUGCUAAAUGGAUAUAAAAUUCGCUGUAACAAUCACACAGAGCUGUUGGGAAACCUCAAAGCAGUAAAUCAAGCAAUUCAAAGAGCAGGUCGUCUGCGGGUUGGAAAACCAAAGAACCAGGUGAUCACUGCUUGUCGGGAUGCAAUUCGAAGCAAUAACAUCAACACACUGUUCAAAAUCAUGCGAGUGGGGACAGCUUCUUCCUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.50 kcal/mol

Ensemble Metrics

Free Energy: -54.09

Frequency: 0.0001

Diversity: 78.49

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(...((((((..(((...(((...(((..(((((...((((((((((((...(((((..........((((.........)))).((((((..((....))..))))))..........)))))...)))))))).)))).))))))))...)))...)))..((((.....((((..((((........))))))))....))))......((((((....((....))....)))))).))))))...)

Thermodynamic Ensemble Prediction

,....{...(((((({{,{,....,|..|{{{{{,{{{{..,|||||{{(((((...(((((.......,,.((((.........)))).(((((({{(....})),.}))))).......,,.}|||}..,||||||||,||||.|}}||{(....))},....,}}||||}}..,||||}.,{{||,,,,..,})}}))))....,,,,......((((((....((....)).,..)))))).})))))...)