Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CADPS2_0000900

Sequence Length

225 nt

GC Content

0.3733

UUUGUUUCAGUGUUGGAAGGCGUGUUGUCUAAGCUGUCAAGGUAUGAUGAAGGCACUUUCUUUUCAUCCAUUCUGUCAUUCACUGUGAAAGCAGCUGCAAAAUAUGUUGAUGUUCCAAAACCAGGAAUGGAUCUGGCAGACACCUAUAUUAUGUUUGUUCGGCAAAACCAAGAUAUUCUUCGAGAAAAGGUCAAUGAGGAAAUGUAUAUAGAAAAGUUAUUUGAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.90 kcal/mol

Ensemble Metrics

Free Energy: -42.86

Frequency: 0.0001

Diversity: 60.56

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((((.((.((((((((((((((.....((((((..(((...((((((((.......))))))))...))).((((.....))))..))))))....))))))))....)))))).))..)))))))(((.....(((..((((((.((((((.((((((........((......))........)))...))).))))))))))))....)))....)))

Thermodynamic Ensemble Prediction

(({{((((.({.((((((((((((((.....((((((..,((.{{((((((((......,)))))))),..}}}.{(((.....))))..))))))....))))))))....)))))).}},,}}}}}}}{{{,||,.{{{..(((((,,((((((.(((({,...,{{..{{...,|,},..,,...}))}..}))).))))))))))))....}}}....)))