Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CADPS2_0003100

Sequence Length

190 nt

GC Content

0.4263

GCAUUUGCCUGGUGGCCUGAUUUAUUGGCUGAACAUGCAGAGAAAUUUUGGGCUUUAUUUACAGUGGAUAUGGACACUGCACUAGAGGCUCAACCGCAAGACUCCUGGGAUAGUUUUCCUCUUUUCCAACUGCUUAAUAAUUUCCUCCGAAAUGACAGUGAAAGCAGCUGCAAAAUAUGUUGAUGUUCCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.50 kcal/mol

Ensemble Metrics

Free Energy: -42.61

Frequency: 0.0013

Diversity: 42.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(((((.((..((((.........))))...)).)))))......(((((((((.....(((((........))))).....)))))))))...........)(((((((.........((((.((.((((((....(((((....)))))........)))))).)).))))........)))))))

Thermodynamic Ensemble Prediction

(({(((((.((.,((((.........)))),..)).)))}}......(((((((((.....(((((........))))).....))))))))}......,....,{((((.{,...,},.,|,||,||.((((((....(((((....))))).....,..)))))).)).},},.,})}{{.,,,,.))