Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CADPS2_0008500

Sequence Length

311 nt

GC Content

0.4019

GCCUGAUGGAAUUGGGACUGUUUCAGUGGAAGAAAAAGAAAGAUUUGAGGAGAUAAAAGAGAGACUCUCUUCCCUUUUAGAAAAUCAGAUAAGCCAUUUCAGAUACUGUUUUCCCUUUGGACGACCUGAAGGUGCUCUAAAAGCUACACUUUCAUUACUUGAAAGGGUUUUAAUGAAAGAUAUUGCCACUCCCAUACCAGCAGAAGAGGUGAAGAAAGUGGUCAGAAAAUGUCUCGAGAAAGCUGCCUUGAUCAAUUACACUAGACUCACAGAAUAUGCCAAAAUAGAAGGCCCAGCAGAAAAGGAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.80 kcal/mol

Ensemble Metrics

Free Energy: -65.45

Frequency: 0.0000

Diversity: 106.86

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..((...((((.(((((.((((((...((..(((..((.(((...((((((.((((((...))))))..((((((((...........(((.((((((.....(((.(((....))).)))))))))).)))))))))).....((((((((((((....))))...)))))))).....((((((..(.((((.........))))..)..)))))).......))))))...))).))..)))..)).....)))).))...))))....).))))..))..))))(.................)

Thermodynamic Ensemble Prediction

{(((,,(,..,||||,,(((({((((((...{{..,,{..,,{((({{.,,,,(({((({((,..,})))),.}}}|||.....}}}}},.,{{,.|{{{{{.,,,.{({.{((,{{{|||.,}}}}}}})}||||,,,,,}},....((((((,,,,,},}}})))},,,,,}}},||,{,{(((((((..,.((((.........))))..}..)))))},....}})))))},,,},,|}}..|}}..,,.....}}}}.}}...}}}}....},}}},..}}..)))){...,.......},,,},)