Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CADPS2_0013100

Sequence Length

197 nt

GC Content

0.4112

GAGCUUCAAAAGUCAUAUGAAGUAAUAGAUCUGAGAUAAUUAUGCUUACUUUAAAAAAAGAUAAUGUUUAAUAAAGACCUCUCAGAUGGGGGACUCAAGGAGAUUUCACCACCACCCAUCCUCGGCCUGUGGUCAAAGUGAAACUCUUCACAGAAAGCACUGGAGUUCUGGCCCUGGAAGAUAAAGAACUGGGAAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.00 kcal/mol

Ensemble Metrics

Free Energy: -42.03

Frequency: 0.0074

Diversity: 53.19

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((((((.........)))))).....((((((((..((((.(((((((((....)))).))).)).)))).......))))))))..(((((((..(((((((((((.(((((((......))...)))))....)))))).))))).(((......))))))))))..)(((...((........))....)))

Thermodynamic Ensemble Prediction

(,((((((.........|}}}}|.....((((((((,.{(((.(((((((((....}))).))).)).}})).,.....))))))))..{{{||||..((((,((((((.(((((((......))...)))))....)))))),))))}.{{{......}))))))))|..|(({,..,,........))}}}.,})