Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CADPS2_0018600

Sequence Length

250 nt

GC Content

0.3400

GGGUAAUCAGUGCACCCAAGCCGAGGACCAAGAAAAACCAUUACCAUUUCCUCUGCCACCCAUCACUGAGGACAUAAGGACUCUGAGCAUCUUAAAUUCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUCUGAACUUAUUCUGAGCAAGGAACAACUCUAUGAAAUGUUUCAGCAGAUUCUGGGUAUUAAAAAACUGGAACACCAGCUCCUUUAUAAUGCAUGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.30 kcal/mol

Ensemble Metrics

Free Energy: -34.92

Frequency: 0.0142

Diversity: 37.22

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..((((((.......((.(((((.....................))))).)).......))))))..)).......))((((((((..((((............................................................(((((.((((.....((((((..((...))..))))))..))))...))))).........((((....))))....))))..))))...))))

Thermodynamic Ensemble Prediction

((((..((((((.......((.(((((..............,......))))).)).......))))))..)).......))((((((((..((({........................................................,,{,{{,,,.{{{|,{...(((({{..{{...}}..})}))).,)}}}..,}}|||.,,......((((....))))....))))..))))...))))