Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CADPS2_0018900

Sequence Length

158 nt

GC Content

0.4241

CAAAGAGACAGUGUUGAGCUCAUGGAUAGCCAAAUAUGAUGCCAUUUACAGAGGUGAAGAGGACUUGUGCAAACAGCCAAAUAGAAUGGCCCUAAGUGCAGUGUCUGAACUUAUUCUGAGCAAGGAACAACUCUAUGAAAUGUUUCAGCAGAUUCUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-27.10 kcal/mol

Ensemble Metrics

Free Energy: -30.67

Frequency: 0.0030

Diversity: 48.22

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((...(((((((((((((((..((((..(((...((..(((.((.((((.......)))).)).)))..))...)))...))))..(((((.(((...))).)))))((((.....)))).....)))))))...).)))))))...)))..

Thermodynamic Ensemble Prediction

...,,((,...(((((((((((((((..,{{,..,,|,..{{,.{,,.(({(({{.....{{{({{((((.....((({.......)))).....)))))}.})))...}}},}}}}).....}},.....)))))))...)}}))))))...)))..