Sequence Details

BLAST PRIMER
Symbol
hsa_CCDC66_0003400
Sequence Length
324 nt
GC Content
0.4290
AGAGAAUGAAUGGAAACCAGCUGAUAUAUUCAGUACUCUGGGGGAAAGGGAAUGUGAUAGAAGUUCGUUGGAAGCAAAAAAAGCCCAGUGGAGGAAAGAGCUAGAUGAACAGGUUGCUUUAAAGAAGAAAGAAAAAGAAGUUUCUGAAAAAUGGAAUGAUCCUUGGAAAAAAUCUGAAAGUGAUAAAAUAAUAUGGGAAAAACAUCAAAUUCUUGACCAAUCUAGGGCUGGAAUGCAGUGGCACAGUCUCAGCUCACUGCAACCUACCCCUCCCAGGCUCAAGCGAUUCUCCUGCCUCAGCCUCCCGAGUAGCUAGGACUACAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-67.90 kcal/mol
Ensemble Metrics
Free Energy: -73.77
Frequency: 0.0001
Diversity: 70.44
Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((...(((...)))(((((.....)))))...(((((((...((((((.((((....(((((((...(((........((....))........))).)))))))..((((((((..(((........((.((.(((((........)))))..)).))........))).))))))))...................)))).))))))..)).....((((.(((..(((((((((.........)).)))))))..))).)))))))))((....)).))))))((((((.(((..(....)..))))))....)))
Thermodynamic Ensemble Prediction
.((((((...(((...}}}(((((.....)))))...(((((((...(((,,,.,.......|{||,{{...,,}......(((((.,,{{,{,.(((({.,.((({..,,,((((((((..,{{....,......,,.{||||}.......|||,,..})}||,,......))).}}}}}}}}..................))))...)))))..))..,)),)))))((..(((((((((.........)).))))))).)),.))))))))))|,....,).))))))((((((.(((..(....)..))))))....)))
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