Sequence Details

BLAST PRIMER
Symbol
hsa_CCDC66_0006200
Sequence Length
318 nt
GC Content
0.3899
AGAGAAUGAAUGGAAACCAGCUGAUAUAUUCAGUACUCUGGGGGAAAGGGAAUGUGAUAGAAGUUCGUUGGAAGCAAAAAAAGCCCAGUGGAGGAAAGAGCUAGAUGAACAGGUUGCUUUAAAGAAGAAAGAAAAAGAAGUUUCUGAAAAAUGGAAUGAUCCUUGGAAAAAAUCUGAAAGUGAUAAAAUAAUAUGGGAAAAACAUCAAAUUCUUGACCAAUCUAGGCUCUUCAAGCAUUCUAUCACAGUCUCGUAGCCAGGUUAUGGUGGUCCAAGCUGAUGGGGCAUUCACAACUUAGAGCUAGUCAGACUUUAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-62.70 kcal/mol
Ensemble Metrics
Free Energy: -70.74
Frequency: 0.0000
Diversity: 76.86
Structure Visualization
Structure Prediction
MFE Structure Prediction
..........(((...)))(((((.....))))).((((((((....((((.((((((((((.((((((((..((.......))))))))))...(((((((((((......((((((((..(((........((.((.(((((........)))))..)).))........))).)))))))).........(((..((............))..)))))))).))))))......)))))))))).)))).((((((((((.(((((.((((......)))).)).))).))))).).))))......))))))))
Thermodynamic Ensemble Prediction
{{{(..(({.(((...||{(((((.....))))}.{,{|||{{....((((.(((((((((({((((((((..((.......))))))))},.{,(((((((((((...,,{((((((((..{{{....,...,..{,.{||||}.......|||,,..})}}}........))).}}))}))}.........{({........},,....,))}.,},)))))}})))))}..,}.)))))))))).)))).,,,||{((({.(((((.((((......)))).))}})).})))).}.}))).}})..)))),,.,
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