Sequence Details

BLAST PRIMER
Symbol
hsa_CCDC66_0009200
Sequence Length
328 nt
GC Content
0.3720
AUAAAUGCCUCAGUGGAUUAAAUCUGUAUGUUACUUUGGCAAGAUUUGCACAUAUUAAGUGAUUAGAAAAAGAGAACUGAACUUUAGAUGGCUUUUAUGGCUGUUGUUUAGGAAACAGUACUGCUGGAGCACCCUUUCAGUGCUGUGAAACAAGAACUGCAAAGAAAAUGGAUUGAAGAGUUGAAUAAGCAAAUAGAAGAUGACCGUCAAAGAAAAAUAGAGGAAAAAAUUAUAUAUUCAAAGCUUUCUCCGUUCUAUGACUGCUCUCUUGGACCCAGCUCAGAUUGAGGAACGAGACAGACGACGACAAAAACAAUUAGAGCAUCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-56.90 kcal/mol
Ensemble Metrics
Free Energy: -64.08
Frequency: 0.0000
Diversity: 79.36
Structure Visualization
Structure Prediction
MFE Structure Prediction
((.....((.....)).....))(((...(((((((((((((...)))).))....))))))).............((((((....(((((((.....)))))))))))))...(((((((((..((.....))...)))))))))......................(((.((.(((((.......((((..............((((.((((.....((((((...................))))))..)))).))))))))))))).)).)))((((.(((((..........................))))).))))..)))
Thermodynamic Ensemble Prediction
((..{..((.....))..}..))(((.(((((.{{((((((,...}))).{{{,..{{||.{{{,{,...,,....||{,,{,},.|||{|||,.}}})}}||||||||,}...(((((((((..((.....}),..)))))))))....,...,,}.}|{.{{{..{((((..((((..(((((((......,,........,(.{{...........}}}}......,,.,.)))))))..)))).)))))))).}}.|{{{{.(((((..(((({......})).))..))))).)).,,..........}}}..,}))))))))
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