Sequence Details

BLAST PRIMER
Symbol
hsa_CCDC66_0012000
Sequence Length
535 nt
GC Content
0.3682
AUGACUUAAAUAUAGGAAUAUUCACCAAUGCAGAAUCACAUUGUGGAUCAUUAAUGGAGAGGGACAUCACAAAUUGUUCAUCUCCUGAGAUUUCGGCAGAACUUAUUGGACAGUUUAGCACCAAGAAAAACAAGCAAGAACUAACUCAGGAUAAAGGAGCCAGCUUAGAAAAAGAAAACAAUCGGUGUAAUGACCAGUGUAAUCAGUUCACAAGAAUAGAGAAACAAACAAAACACAUGAAGAAAUAUCCUAAAAGGCCUGAUUGGAAUAUAAAUAAGCCACCUAAAAGGUAUAUUCCAGCAUCAGAAAAGUACCCUAAACAGCUUCAAAAGCAGAGAGAAGAAAAAAAAGUAAGGAGGCAGAUGGAAUUGCUUCAUUUGGUAGAAAAAAAUAAUCCUGGGCACCUCUCUCAAAACAGAGGCAUUUCACCAGAAAUUUUUCAUUCAUCUCAUCAAGAAACGGAGUCAAAGUUGAGGUGGCAUCUAGUCAAAAAGGAAGAAGAGCCUCUGAAUAUUCAUUCAUUCAGCAAGGAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-93.30 kcal/mol
Ensemble Metrics
Free Energy: -106.33
Frequency: 0.0000
Diversity: 142.29
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((....))))(((((((((.((((........)))))))))).)))...(((((((........(((((((((((((.((((....)))).)))......)))))))))).((..............)).........((((((((..((((.....(((.................(((......)))..(((..((.((((....)))).))...))).............))).....)))).......(((((((((((((......(((........)))))))))))..)))))................((((...))))................(.((((((((((........)))))).)))).)...........))))))))..))))))).....(((((((.((((.((.............((((((((....................))))))))..............))..)))).))))))).....))))(..(((.....)))..)
Thermodynamic Ensemble Prediction
(((({({,....}}}}{,{((((({{((((........)))))))))).,},...(((((,(({{{.....,,,|||||,|||}|((({..,||}|,,}}..,..,|||,}}||}}.||.,,...........}}..,,.....{{{{{({{..,{{,{{,..{{{,,.....,.......|,(((,,....))}.{({{..((.((((....)))).))...}}.......,,,,.,,,.,.....,|||...,}}.(((((((((((((......,{{.,,.....)))))))))))..})))).........,,.....((({...,))).,,,,|,.,.........,,,,(((((({......,)))))).}}}}.}...........,))))}}}..}}}}))}}....(((((((.((((.{{.|,,...,}}}.,{(((((((.,...........,,...,.)))))))},.,,,..,......})..)))).))))))).....)))}|,.(((.....,)),.)
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