Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0002000
Sequence Length
250 nt
GC Content
0.2800
ACUCCAUUUCCAAAAAAAAAGAAAAAAAAAUAUUAGUCAUUUCCCUAAGACUAAGUAAGGACAGUUGGCUUUAAUUCAGUGUCCCUUCCUUUUUUUCUGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGUGUGUUUCAGUAAUAUAUUAGCAGGGACUCUAAUAGGGUGAUUUUUCAUAGUCAGAAAGGGCCACUGCCGCUAAACUCCUUAUUUAUUUAUUGUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-29.00 kcal/mol
Ensemble Metrics
Free Energy: -33.68
Frequency: 0.0005
Diversity: 55.22
Structure Visualization
Structure Prediction
MFE Structure Prediction
(.....)((((((...................((((((..........))))))(((((((...(((((.......(((((.(((((.((.............................................................((((((((.....)))))))).......(((((...)))))((((......)))))).))))).)))))..)))))..))))))).......))).)))
Thermodynamic Ensemble Prediction
(.....}((((({.,,,...............,(((((.,......,.)))))|(((((((.,,(((((.......(((((.(((({.,,...,,|||,....................................................{{{({(((.....}}}})))}.,,,|,,{((((...}))}|(({{..,,..})))}}.})))).)))))..)))}}.,)))))))},.,}}.))).)))
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