Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0002600
Sequence Length
231 nt
GC Content
0.5065
CUAUUGUUAACCGUGAUGGCACCCGCUAUGUCCAGAAAGGAGAAUACAGAACGAAUCCUGAAGACAUCUACCCCAGCAACCCUACUGAUGAUGACGUGAGCAGCGGCUCCUCCAGUGAAAGGAGCAGCACUUCAGGAGGUUACAUCUUUUACACCUUUUCUACUGUACACCCCAUCCCAGACGAAGACAGUCCCUGGAUCACCGACAGCACAGACAGAAUCCCUGCUACCA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-43.70 kcal/mol
Ensemble Metrics
Free Energy: -47.02
Frequency: 0.0045
Diversity: 35.94
Structure Visualization
Structure Prediction
MFE Structure Prediction
(...........)((.(((((.......((((.(((((((.......(((.....((((((((.((((.....(((........)))..)))).........((.((((((........)))))).)).)))))))).......))).......))))))).((((.......((((..(((.......)))...)))).....))))....)))).......))))).))
Thermodynamic Ensemble Prediction
(...........)((.(((((.......((((.(((((((.{,....{{(,....((((((((.((((.....(((........)))..)))).,|,.....{{.((((((........)))))).)).)))))))).,},...}}}.,,...}))))))).((((.......((((..(((.......)))...)))).....))))....)))).......))))).))
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