Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0003400
Sequence Length
246 nt
GC Content
0.4512
GUACGUCUUCAAAUACCAUCUCAGCAGGCUGGGAGCCAAAUGAAGAAAAUGAAGAUGAAAGAGACAGACACCUCAGUUUUUCUGGAUCAGGCAUUGAUGAUGAUGAAGAUUUUAUCUCCAGCACCACAGAUGUAGACAGAAAUGGCACCACUGCUUAUGAAGGAAACUGGAACCCAGAAGCACACCCUCCCCUCAUUCACCAUGAGCAUCAUGAGGAAGAAGAGACCCCACAUUCUACAAGCACAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-43.00 kcal/mol
Ensemble Metrics
Free Energy: -48.09
Frequency: 0.0003
Diversity: 62.21
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((((.......(((((...((((...))))...)).)))...))))))))...(((........))).((.(((((((((((........))))((((((...))))))(((((..((.((...((((...............))))...))..))...)))))..))))))).))...(((...((.(((..(((((...)))))..))))).)))...........)))........
Thermodynamic Ensemble Prediction
{{.((((((((.......(((((...((((...))))...))},))...))))))))...(((........))).{(.((((((,,((,.{{{{{..|(,((,((.({{,.,,)))|,||,}},|}..}}}|}||.}}},,,.|||....,||||,.||..||...||||...))))}},.,,...{{{..,((.(((..(((((...)))))..)))}}.)}).........,,},,..,,....
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