Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0003600
Sequence Length
223 nt
GC Content
0.3946
GAACCGAGCAGAGUAAUUCUCAGAGCUUCUCUACAUCACAUGAAGGCUUGGAAGAAGAUAAAGACCAUCCAACAACUUCUACUCUGACAUCAAGCAGUAAGGAUUAUAAAACCUAGUUGGCUUCAGCUAUUGAUAAGAAUCAAUCAAUUAUGGGUACUUUUGCAGUGUCUUUGGUGGAGGUGCAUCCAUUAGCUGCCGUUACACUGUUACUUUUAAUCAAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-38.30 kcal/mol
Ensemble Metrics
Free Energy: -43.64
Frequency: 0.0002
Diversity: 83.04
Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((((((((((......((((...)))).........((((..(((((.(...........).)))))...))))))))))).).))........(((.........)))(((((....)))))((((((........))))))....))).((((((((((((...((((((.((((....))))..))))))..))))))...........))))))
Thermodynamic Ensemble Prediction
..(({{{((((((({.,,{{{,((({{{|||..........||||}}||{||,{,,,..........}}},....}}}}||||}}}.|.|...{{{{,,(({.{{......}}|(((((....)))))|(((((....,}},))}},,.,}})||.|{{{{(({{{{|...{{||||}|||{....)))}.,))))})..))}))))..,,,,,....}))))
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