Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0005600
Sequence Length
204 nt
GC Content
0.4461
AUAGGAAUGAUGUCACAGGUGGAAGAAGAGACCCAAAUCAUUCUGAAGGCUCAACUACUUUACUGGAAGGUUAUACCUCUCAUUACCCACACACGAAGGAAAGCAGGACCUUCAUCCCAGUGACCUCAGCUAAGACUGGGUCCUUUGGAGUUACUGCAGUUACUGUUGGAGAUUCCAACUCUAAUGUCAAUCGUUCCUUAUCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-46.60 kcal/mol
Ensemble Metrics
Free Energy: -51.05
Frequency: 0.0007
Diversity: 66.43
Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((((((...(((..((((.((((.((((((.......((((.((..........(((((((.((((...))))................(((((.........)))))...))))))))))))).......))))))))))..(((.((....)).)))((((((...)))))))))).)))..)))))))))......
Thermodynamic Ensemble Prediction
..(((((((((...{{{.{(((,.(({({(({{{,.,{{.{,(((((({........,,||{{{|||||||,...,|}}}}.}}..}},}....{{{{|........,)))))...||||}||||}|||......}))))))}}}}||{{{,.|,||,{|,|,,((((({...)))))),,)),))},.)))))))))......
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