Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0005900
Sequence Length
360 nt
GC Content
0.4667
GUACGUCUUCAAAUACCAUCUCAGCAGGCUGGGAGCCAAAUGAAGAAAAUGAAGAUGAAAGAGACAGACACCUCAGUUUUUCUGGAUCAGGCAUUGAUGAUGAUGAAGAUUUUAUCUCCAGCACCAUUUCAACCACACCACGGGCUUUUGACCACACAAAACAGAACCAGGACUGGACCCAGUGGAACCCAAGCCAUUCAAAUCCGGAAGUGCUACUUCAGACAACCACAAGGAUGACUGCAGAUGUAGACAGAAAUGGCACCACUGCUUAUGAAGGAAACUGGAACCCAGAAGCACACCCUCCCCUCAUUCACCAUGAGCAUCAUGAGGAAGAAGAGACCCCACAUUCUACAAGCACAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-69.00 kcal/mol
Ensemble Metrics
Free Energy: -75.91
Frequency: 0.0000
Diversity: 105.08
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((((((.......(((((...((((...))))...)).)))...))))))))...(((........))).....((((((((..((....((((.((.((.((((...)))).)).)).))))....))........(((((....((((......(((........)))......)))).....)))))......))))))))(((((.((.(((.((.((....)).)).))).)).((((((.......((((....))))...........((((...)))).........(((...((.(((..(((((...)))))..))))).))).........)))))))))))..
Thermodynamic Ensemble Prediction
,,.((((((((.......(((((...((((...))))...))},))...))))))))...(((........))).{{.{((((((((,,{{...,{||(,{({{(.{,,..}})))|,||{,,,|}||,,..||...,,..{(({(({,{.{{,,......{{|..,..,,.})),...,.)))).....},}||.,{,..}}}|||},((((({{({({{.((.((....)).)).|||{,,..||||.,.},,.}}|}}}..}})|,,.}}}}}}...||||,..))))}}}.},...{{{..,((.(((..(((((...)))))..)))}}.)}).........,})}}..,,....
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