Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0006300
Sequence Length
319 nt
GC Content
0.4357
GUACGUCUUCAAAUACCAUCUCAGCAGGCUGGGAGCCAAAUGAAGAAAAUGAAGAUGAAAGAGACAGACACCUCAGUUUUUCUGGAUCAGGCAUUGAUGAUGAUGAAGAUUUUAUCUCCAGCACCAUCCAGGCAACUCCUAGUAGUACAACGGAAGAAACAGCUACCCAGAAGGAACAGUGGUUUGGCAACAGAUGGCAUGAGGGAUAUCGCCAAACACCCAAAGAAGACUCCCAUUCGACAACAGGGACAGCUGUUUCAAAGAACUUCUUGAUUUCUGCAUUAAUUUCAUUAUUUACCCAGAAGUCAUUCAGGAGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-68.00 kcal/mol
Ensemble Metrics
Free Energy: -74.89
Frequency: 0.0000
Diversity: 61.19
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((((((.......(((((...((((...))))...)).)))...))))))))...(((........))).(((..(((((((..((..(((..(((((........)))))..)))..))))))))).)))(((............))).(((((((((.(((..........((.(((((....))))).))....((((..((.................)).))))...........)))..)))))))))......((((((((((((((....(((......)))....)))))))))...)))))...
Thermodynamic Ensemble Prediction
...((((((((.......(((((...((((...))))...))},))...))))))))...(((,,.,....})).|||},|((((((..,({.,{(..(((((........)))))..)))}.,,))))))}..,|(((..{,......,.}},.(((((((((.{((....}|....((.(((((,,..}}|||,}|....,{{.,,||}}}},,,.,,,...,.....||||.,,,.......)))..)))))))))......((((((((((((((....(((......)))....)))))))))...)))))...
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